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MLIPAudit documentation
MLIPAudit documentation
  • Installation
  • Tutorial: CLI tools
  • Tutorial: Adding a new benchmark
  • Benchmarks
    • General
      • Stability
      • Scaling
    • Small Molecules
      • Conformer Selection
      • Dihedral scan
      • Noncovalent Interactions
      • Ring planarity
      • Tautomers
      • Reference geometry stability
      • Bond length distribution
      • Reactivity
      • Nudged elastic band
    • Molecular Liquids
      • Radial distribution function
    • Biomolecules
      • Folding Stability
        • RMSD & TM-score
        • Compactness (Radius of gyration)
        • Secondary Structure matching
      • Protein Sampling
  • Model Scores
  • API reference
    • Benchmark
    • I/O of model outputs and benchmark results
    • Run Mode
    • Scoring
    • Trajectory Helpers
    • Inference and simulation helpers
    • UI page wrapper
    • Conformer Selection
    • Dihedral Scan
    • Noncovalent Interactions
    • Tautomers
    • Ring planarity
    • Reference Geometry Stability
    • Bond length distribution
    • Water Radial Distribution
    • Solvent radial distribution
    • Reactivity
    • Nudged Elastic Band
    • Folding Stability
    • Sampling
    • Stability
    • Scaling
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Small MoleculesΒΆ

Small molecule benchmarks are focused on the properties and dynamics of small molecules, including their conformational sampling, stability, and interactions with other molecules.

  • Conformer Selection
  • Dihedral scan
  • Noncovalent Interactions
  • Ring planarity
  • Tautomers
  • Reference geometry stability
  • Bond length distribution
  • Reactivity
  • Nudged elastic band
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Conformer selection
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Scaling
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